Bioconductor Missing Data

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Missing Data TCGAbiolinks Kaplan-Meier LIHC Xenabrowser

6.2 years ago jam526 • 0

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3.7k

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deseq2 sample_table missing data

updated 7.0 years ago by g.wang2 • 0 • written 10.8 years ago by anpham ▴ 70

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deseq2 paired samples missing data multiple treatments

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by greg.deakin • 0

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3.5k

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limma missing data methylation normalization

updated 8.2 years ago by Aaron Lun ★ 29k • written 8.2 years ago by mheydarpour ▴ 10

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3.1k

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limma contrast missing data lmfit makecontrasts

updated 8.4 years ago by Gordon Smyth 53k • written 8.4 years ago by wewolski ▴ 10

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pcamethods missing data

8.8 years ago eli-sava • 0

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software error rnaseq wgcna missing data

10.1 years ago • updated 9.7 years ago dvillarlozano ▴ 10

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cellhts2 upload missing data

updated 10.0 years ago by Joseph Barry ▴ 160 • written 10.0 years ago by zmorehouse • 0

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missing data filter

updated 10.1 years ago by James W. MacDonald 68k • written 10.1 years ago by rgescudero • 0

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missing data missing value imputation impute MICE bioconductor

10.3 years ago svlachavas ▴ 840

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software error missing data workflowinstall

10.7 years ago anoll2 • 0

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bayseq missing data

10.7 years ago k.w.lau • 0

12 results • Page 1 of 1

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Comment: Incosistencies in buildSNNGraph() function by ATpoint ★ 5.0k

Just played with this a bit and I think it comes down to not having a fixed seed before running the leiden thingy. Same goes for PCA and UM…

Answer: Incosistencies in buildSNNGraph() function by Aaron Lun ★ 29k

The most obvious thing that comes to mind is the RNG seed. `cluster_leiden()` does some random number generation, somewhere deep in the **i…

Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaas33ocissalpc • 0

Thank you for sharing the EuroBioC2026 workshop opportunity. I m interested in hosting a hands on session teaching reproducible data analys…

Comment: Ensembl plants at annotationHub? by jwp48 • 0

Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!

Answer: Combining two proteomics datasets with limpa by Gordon Smyth 53k

Hi Andrew, We don't have that much experience combining different datasets with limpa yet, but my feeling is that the same DPC should be u…

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Answer: Incosistencies in buildSNNGraph() function

Answer: Where do the filename come from in the LOLA datasets?

Bioconductor Maintainer Application

A: What is logFC and "B" in methylation analysis ??

limma moderated t-statistics and B-statistics

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Popular Question to Lluís Revilla Sancho ▴ 760